No. words: 1511; after pruning: 1485


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 13.2 (1,1:727)  690  0.00 0.14 0.00  MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1        3   721 (29)  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   (34)   727     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   761 
   74    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1    41 
   78  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   684 
   82    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1    49 
   86  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   676 
   94    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1    61 
  102  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   660 
  154    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   121 
  162  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   600 
  166    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   133 
  238  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   524 
  246    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   213 
  270  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   492 
  302    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   269 
  326  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   436 
  350    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   317 
  378  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   384 
  494    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   461 
  550  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   212 
  598    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   565 
  606  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1   156 
  634    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   601 
  670  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1    92 
  690    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   657 
  694  C MoSU021R_E09_BE446380Ta21P020B11P005G111R1_071.ab1    68 
  714    MoSU021F_E09_BE446380Ta21P020B11P005G111F1_071.ab1   681 
Contig length: old 783, new 783

Contig length: old 783, new 783
New start: 0