No. words: 1513; after pruning: 1487


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 14.1 (1,1:728)  685  0.00 0.14 0.00  MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1        4   719 (32)  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   (35)   727    11 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   762 
   63    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1    30 
  115  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   648 
  119    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1    86 
  163  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   600 
  167    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   134 
  227  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   536 
  231    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   198 
  243  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   520 
  259    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   226 
  271  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   492 
  283    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   250 
  299  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   464 
  307    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   274 
  355  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   408 
  419    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   386 
  551  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   212 
  635    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   602 
  651  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1   112 
  655    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   622 
  667  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1    96 
  691    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   658 
  695  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1    68 
  715    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   682 
  719  C MoSU021R_F09_BE446380Ta22P020B11P005G111R1_069.ab1    44 
  723    MoSU021F_F09_BE446380Ta22P020B11P005G111F1_069.ab1   690 
Contig length: old 784, new 784

Contig length: old 784, new 784
New start: 0