No. words: 1486; after pruning: 1460


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:702)  667  0.00 0.14 0.14  MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1        1   703 (43)  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   (37)   703     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   740 
   41    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1     4 
   45  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   696 
   58    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1    20 
   70  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   671 
   74    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1    36 
   86  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   655 
   94    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1    56 
  162  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   579 
  166    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1   128 
  242  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   499 
  246    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1   208 
  294  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   447 
  318    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1   280 
  378  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   363 
  434    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1   396 
  514  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1   227 
  654    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1   616 
  662  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1    79 
  706    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1   668 
  710  C MoSU021R_G09_BE446380Ta23P020B11P005G111R1_067.ab1    31 
  718    MoSU021F_G09_BE446380Ta23P020B11P005G111F1_067.ab1   680 
Contig length: old 783, new 784

Contig length: old 784, new 784
New start: 0