No. words: 1508; after pruning: 1482


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.1 (1,1:727)  688  0.00 0.14 0.00  MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1        4   722 (30)  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   (30)   726     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   756 
   90    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1    62 
   98  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   659 
  106    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1    78 
  110  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   647 
  118    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1    90 
  122  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   635 
  150    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1   122 
  158  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   599 
  230    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1   202 
  278  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   479 
  346    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1   318 
  402  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1   355 
  566    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1   538 
  670  C MoSU021R_A07_BE446380Td01P020B11P005G111R1_063.ab1    87 
  710    MoSU021F_A07_BE446380Td01P020B11P005G111F1_063.ab1   682 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0