No. words: 1502; after pruning: 1476


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 14.3 (1,1:721)  685  0.00 0.14 0.00  MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1        1   716 (30)  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1   (33)   723     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1   756 
   78    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1    44 
  106  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1   651 
  110    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1    76 
  146  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1   611 
  190    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1   156 
  254  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1   503 
  258    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1   224 
  262  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1   495 
  522    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1   488 
  546  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1   211 
  650    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1   616 
  662  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1    95 
  686    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1   652 
  690  C MoSU021R_B07_BE446380Td02P020B11P005G111R1_061.ab1    67 
  706    MoSU021F_B07_BE446380Td02P020B11P005G111F1_061.ab1   672 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0