No. words: 1507; after pruning: 1481


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.7 (1,1:727)  684  0.00 0.14 0.14  MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1        4   722 (29)  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   (31)   725     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   756 
   59    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1    30 
   63  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   694 
   71    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1    42 
   75  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   682 
   79    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1    50 
   87  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   670 
   95    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1    66 
  107  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   650 
  111    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1    82 
  123  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   634 
  131    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   102 
  175  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   582 
  179    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   150 
  223  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   534 
  227    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   198 
  235  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   522 
  243    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   214 
  255  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   502 
  263    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   234 
  267  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   490 
  279    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   250 
  287  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   470 
  299    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   270 
  327  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   430 
  331    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   302 
  343  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   414 
  503    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   474 
  547  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   210 
  631    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   602 
  647  C MoSU021R_C07_BE446380Td03P020B11P005G111R1_059.ab1   110 
  715    MoSU021F_C07_BE446380Td03P020B11P005G111F1_059.ab1   686 
Contig length: old 779, new 780

Contig length: old 780, new 780
New start: 0