No. words: 1498; after pruning: 1472


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 14.2 (1,1:717)  684  0.00 0.14 0.00  MoSU021F_D07_BE446380Td04P020B11P005G111F1_057.ab1        4   718 (34)  C MoSU021R_D07_BE446380Td04P020B11P005G111R1_057.ab1   (30)   716     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_D07_BE446380Td04P020B11P005G111R1_057.ab1   746 
   70    MoSU021F_D07_BE446380Td04P020B11P005G111F1_057.ab1    42 
   78  C MoSU021R_D07_BE446380Td04P020B11P005G111R1_057.ab1   669 
   82    MoSU021F_D07_BE446380Td04P020B11P005G111F1_057.ab1    54 
  102  C MoSU021R_D07_BE446380Td04P020B11P005G111R1_057.ab1   645 
  118    MoSU021F_D07_BE446380Td04P020B11P005G111F1_057.ab1    90 
  142  C MoSU021R_D07_BE446380Td04P020B11P005G111R1_057.ab1   605 
  190    MoSU021F_D07_BE446380Td04P020B11P005G111F1_057.ab1   162 
  278  C MoSU021R_D07_BE446380Td04P020B11P005G111R1_057.ab1   469 
  650    MoSU021F_D07_BE446380Td04P020B11P005G111F1_057.ab1   622 
  662  C MoSU021R_D07_BE446380Td04P020B11P005G111R1_057.ab1    85 
  710    MoSU021F_D07_BE446380Td04P020B11P005G111F1_057.ab1   682 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0