No. words: 1504; after pruning: 1478


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.9 (1,1:721)  678  0.14 0.14 0.14  MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1        1   716 (30)  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   (36)   722     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   758 
   57    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1    20 
   61  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   698 
   85    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1    48 
  113  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   646 
  121    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1    84 
  125  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   634 
  133    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1    96 
  149  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   610 
  193    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1   156 
  253  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   506 
  325    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1   288 
  405  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   354 
  417    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1   380 
  549  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   210 
  581    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1   544 
  609  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1   150 
  649    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1   612 
  669  C MoSU021R_F07_BE446380Td06P020B11P005G111R1_053.ab1    90 
  697    MoSU021F_F07_BE446380Td06P020B11P005G111F1_053.ab1   660 
Contig length: old 782, new 783

Contig length: old 783, new 783
New start: 0