No. words: 1508; after pruning: 1482


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.1 (1,1:727)  684  0.00 0.14 0.14  MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1        4   722 (29)  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   (32)   725     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   757 
   72    MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1    42 
   76  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   682 
   80    MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1    50 
  108  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   650 
  120    MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1    90 
  148  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   610 
  152    MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1   122 
  256  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   502 
  260    MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1   230 
  264  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   494 
  624    MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1   594 
  644  C MoSU021R_G07_BE446380Td07P020B11P005G111R1_051.ab1   114 
  712    MoSU021F_G07_BE446380Td07P020B11P005G111F1_051.ab1   682 
Contig length: old 780, new 781

Contig length: old 781, new 781
New start: 0