No. words: 1512; after pruning: 1486


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.4 (1,1:727)  688  0.00 0.14 0.00  MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1        4   722 (30)  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   (34)   726     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   760 
   62    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1    30 
   78  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   683 
   82    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1    50 
   90  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   671 
   94    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1    62 
  102  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   659 
  106    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1    74 
  118  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   643 
  122    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1    90 
  126  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   635 
  134    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   102 
  162  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   599 
  166    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   134 
  174  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   587 
  182    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   150 
  266  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   495 
  270    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   238 
  278  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   483 
  310    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   278 
  314  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   447 
  318    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   286 
  330  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   431 
  342    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   310 
  398  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1   363 
  526    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   494 
  670  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1    91 
  686    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   654 
  694  C MoSU021R_H07_BE446380Td08P020B11P005G111R1_049.ab1    67 
  706    MoSU021F_H07_BE446380Td08P020B11P005G111F1_049.ab1   674 
Contig length: old 784, new 784

Contig length: old 784, new 784
New start: 0