No. words: 1507; after pruning: 1481


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.5 (1,1:717)  682  0.00 0.14 0.00  MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1        1   712 (36)  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   (40)   719     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   759 
   73    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1    32 
   77  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   683 
   81    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1    40 
  105  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   655 
  113    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1    72 
  133  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   627 
  141    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   100 
  161  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   599 
  181    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   140 
  197  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   563 
  225    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   184 
  237  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   523 
  245    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   204 
  253  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   507 
  265    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   224 
  269  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   491 
  305    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   264 
  313  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   447 
  317    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   276 
  329  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   431 
  337    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   296 
  353  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   407 
  509    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   468 
  533  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1   227 
  573    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   532 
  669  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1    91 
  685    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   644 
  689  C MoSU021R_A08_BE446380Td09P020B11P005G111R1_064.ab1    71 
  713    MoSU021F_A08_BE446380Td09P020B11P005G111F1_064.ab1   672 
Contig length: old 789, new 789

Contig length: old 789, new 789
New start: 0