No. words: 1536; after pruning: 1496


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.4 (1,1:744)  731  0.27 0.00 0.00  MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1        1   745 (22)  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   (24)   745     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   769 
   28    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1     4 
  409  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   361 
  413    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   389 
  425  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   345 
  433    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   409 
  469  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   301 
  477    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   453 
  509  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   261 
  513    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   489 
  525  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   245 
  529    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   505 
  533  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   237 
  541    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   517 
  557  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   213 
  561    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   537 
  569  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   201 
  585    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   561 
  589  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   181 
  593    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   569 
  597  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   173 
  633    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   609 
  637  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1   133 
  745    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   721 
  749  C MoSU006R_C05_BE471272As01P015D04D101R1_034.ab1    21 
  765    MoSU006F_C05_BE471272As01P015D04D101F1_034.ab1   741 
Contig length: old 791, new 791

Contig length: old 791, new 791
New start: 0