No. words: 1353; after pruning: 1327


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:540)  495  1.48 0.00 0.18  MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1        1   541 (125)  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   (147)   540     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   687 
  178    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1    31 
  190  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   498 
  205    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1    58 
  222  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   466 
  226    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1    79 
  234  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   454 
  242    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1    95 
  246  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   442 
  254    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   107 
  258  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   430 
  262    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   115 
  266  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   422 
  302    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   155 
  326  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   362 
  330    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   183 
  338  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   350 
  342    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   195 
  346  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   342 
  354    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   207 
  406  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   282 
  426    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   279 
  438  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   250 
  446    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   299 
  450  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   238 
  462    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   315 
  470  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   218 
  474    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   327 
  494  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   194 
  506    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   359 
  530  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   158 
  534    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   387 
  538  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   150 
  554    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   407 
  562  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1   126 
  582    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   435 
  590  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1    98 
  618    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   471 
  638  C MoSU002R_G03_BE471272Ld01P005B03B091R1_020.ab1    50 
  642    MoSU002F_G03_BE471272Ld01P005B03B091F1_020.ab1   495 
Contig length: old 812, new 813

Contig length: old 813, new 813
New start: 0