No. words: 1314; after pruning: 1288


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:507)  474  0.98 0.20 0.00  MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1        1   508 (161)  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   (136)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   645 
  258    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   121 
  262  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   384 
  286    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   149 
  290  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   356 
  354    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   217 
  394  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   252 
  406    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   269 
  446  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   200 
  474    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   337 
  482  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   164 
  486    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   349 
  490  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   156 
  514    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   377 
  522  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   124 
  526    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   389 
  530  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1   116 
  554    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   417 
  586  C MoSU002R_H03_BE471272Ld02P005B03B091R1_028.ab1    60 
  594    MoSU002F_H03_BE471272Ld02P005B03B091F1_028.ab1   457 
Contig length: old 806, new 806

Contig length: old 806, new 806
New start: 0