No. words: 1329; after pruning: 1303


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:530)  485  1.88 0.00 0.00  MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1        1   531 (136)  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   (131)   531     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   662 
  164    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1    33 
  172  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   491 
  192    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1    61 
  224  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   439 
  228    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1    97 
  232  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   431 
  248    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   117 
  252  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   411 
  292    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   161 
  296  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   367 
  343    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   212 
  379  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   284 
  411    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   280 
  419  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   244 
  435    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   304 
  439  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1   224 
  531    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   400 
  587  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1    76 
  595    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   464 
  603  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1    60 
  607    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   476 
  615  C MoSU002R_A04_BE471272Ld03P005B03B091R1_021.ab1    48 
  619    MoSU002F_A04_BE471272Ld03P005B03B091F1_021.ab1   488 
Contig length: old 798, new 798

Contig length: old 798, new 798
New start: 0