No. words: 1697; after pruning: 1657


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.6 (1,1:770)  756  0.13 0.13 0.00  MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1        1   771 (46)  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   (108)   772     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  382 nodes

 193 str. conn. components

Path
    1  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   880 
  112    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1     4 
  116  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   765 
  129    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1    20 
  141  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   740 
  145    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1    36 
  420  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   461 
  428    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   319 
  496  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   385 
  500    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   391 
  516  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   365 
  520    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   411 
  532  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   349 
  596    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   487 
  616  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   265 
  620    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   511 
  624  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   257 
  636    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   527 
  644  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   237 
  648    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   539 
  660  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   221 
  668    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   559 
  672  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   209 
  700    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   591 
  704  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   177 
  740    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   631 
  744  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1   137 
  852    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   743 
  856  C MoSU006R_A06_BE471272Ld03P015D04D101R1_037.ab1    25 
  876    MoSU006F_A06_BE471272Ld03P015D04D101F1_037.ab1   767 
Contig length: old 926, new 926

Contig length: old 926, new 926
New start: 0