No. words: 1388; after pruning: 1362


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.0 (1,1:564)  548  0.00 0.00 0.00  MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1        1   564 (120)  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   (139)   565     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   704 
  199    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1    60 
  203  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   502 
  207    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1    68 
  219  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   486 
  243    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   104 
  247  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   458 
  251    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   112 
  259  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   446 
  279    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   140 
  347  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   358 
  359    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   220 
  399  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   306 
  407    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   268 
  427  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   278 
  431    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   292 
  459  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   246 
  467    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   328 
  475  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   230 
  479    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   340 
  511  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   194 
  515    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   376 
  519  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   186 
  535    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   396 
  539  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   166 
  543    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   404 
  555  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   150 
  579    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   440 
  591  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   114 
  595    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   456 
  603  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1   102 
  607    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   468 
  611  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1    94 
  623    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   484 
  631  C MoSU002R_D04_BE471272Ld06P005B03B091R1_030.ab1    74 
  635    MoSU002F_D04_BE471272Ld06P005B03B091F1_030.ab1   496 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0