No. words: 1617; after pruning: 1577


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:749)  725  0.40 0.13 0.13  MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1        1   750 (23)  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   (94)   750     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   844 
   98    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1     4 
  102  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   743 
  115    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1    20 
  119  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   726 
  131    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1    36 
  482  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   363 
  486    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   391 
  502  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   343 
  506    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   411 
  510  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   335 
  571    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   477 
  575  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   270 
  595    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   501 
  603  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   242 
  607    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   513 
  611  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   234 
  635    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   541 
  639  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   206 
  679    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   585 
  683  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   162 
  687    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   593 
  691  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   154 
  727    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   633 
  731  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1   114 
  831    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   737 
  835  C MoSU006R_D06_BE471272Ld06P015D04D101R1_046.ab1    10 
  839    MoSU006F_D06_BE471272Ld06P015D04D101F1_046.ab1   745 
Contig length: old 867, new 867

Contig length: old 867, new 867
New start: 0