No. words: 1342; after pruning: 1316


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:541)  522  0.00 0.00 0.18  MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1        1   542 (120)  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   (139)   541     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   680 
  199    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1    60 
  203  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   478 
  255    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   116 
  259  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   422 
  299    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   160 
  307  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   374 
  371    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   232 
  379  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   302 
  447    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   308 
  475  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   206 
  511    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   372 
  515  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   166 
  547    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   408 
  555  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   126 
  571    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   432 
  579  C MoSU002R_E04_BE471272Ld07P005B03B091R1_023.ab1   102 
  615    MoSU002F_E04_BE471272Ld07P005B03B091F1_023.ab1   476 
Contig length: old 800, new 801

Contig length: old 801, new 801
New start: 0