No. words: 511; after pruning: 485


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.3 (1,1:234)  205  0.00 0.44 0.88  MoSU015F_B06_BE471272Ta18P023G01P005B091F1_046.ab1       10   237 (47)  C MoSU015R_B06_BE471272Ta18P023G01P005B091R1_046.ab1   (0)   227     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  104 nodes

 54 str. conn. components

Path
    1    MoSU015F_B06_BE471272Ta18P023G01P005B091F1_046.ab1     1 
   13  C MoSU015R_B06_BE471272Ta18P023G01P005B091R1_046.ab1   224 
   33    MoSU015F_B06_BE471272Ta18P023G01P005B091F1_046.ab1    33 
   41  C MoSU015R_B06_BE471272Ta18P023G01P005B091R1_046.ab1   196 
   45    MoSU015F_B06_BE471272Ta18P023G01P005B091F1_046.ab1    45 
   57  C MoSU015R_B06_BE471272Ta18P023G01P005B091R1_046.ab1   180 
   73    MoSU015F_B06_BE471272Ta18P023G01P005B091F1_046.ab1    72 
   89  C MoSU015R_B06_BE471272Ta18P023G01P005B091R1_046.ab1   148 
  125    MoSU015F_B06_BE471272Ta18P023G01P005B091F1_046.ab1   124 
Contig length: old 284, new 285

Contig length: old 285, new 285
New start: 0