No. words: 981; after pruning: 955


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:431)  405  0.93 0.00 0.23  MoSU015F_D01_BE471272Td04P005B03P023B021F1_009.ab1        1   432 (61)  C MoSU015R_D01_BE471272Td04P005B03P023B021R1_009.ab1   (57)   431     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C MoSU015R_D01_BE471272Td04P005B03P023B021R1_009.ab1   488 
  148    MoSU015F_D01_BE471272Td04P005B03P023B021F1_009.ab1    92 
  152  C MoSU015R_D01_BE471272Td04P005B03P023B021R1_009.ab1   337 
  192    MoSU015F_D01_BE471272Td04P005B03P023B021F1_009.ab1   136 
  200  C MoSU015R_D01_BE471272Td04P005B03P023B021R1_009.ab1   289 
  208    MoSU015F_D01_BE471272Td04P005B03P023B021F1_009.ab1   152 
  308  C MoSU015R_D01_BE471272Td04P005B03P023B021R1_009.ab1   181 
  332    MoSU015F_D01_BE471272Td04P005B03P023B021F1_009.ab1   276 
Contig length: old 549, new 549

Contig length: old 549, new 549
New start: 0