No. words: 569; after pruning: 543


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 2.7 (1,1:234)  207  0.00 0.00 1.30  MoSU015F_G04_BE471272Td07P023G01P005B091F1_020.ab1        7   237 (47)  C MoSU015R_G04_BE471272Td07P023G01P005B091R1_020.ab1   (57)   228     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  110 nodes

 57 str. conn. components

Path
    1  C MoSU015R_G04_BE471272Td07P023G01P005B091R1_020.ab1   285 
  129    MoSU015F_G04_BE471272Td07P023G01P005B091F1_020.ab1    78 
  133  C MoSU015R_G04_BE471272Td07P023G01P005B091R1_020.ab1   153 
  173    MoSU015F_G04_BE471272Td07P023G01P005B091F1_020.ab1   122 
Contig length: old 334, new 335

Contig length: old 335, new 335
New start: 0