No. words: 970; after pruning: 944


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:453)  432  0.22 0.00 0.44  MoSU015F_A02_BE471272Td09P005B03P023B021F1_016.ab1        1   455 (15)  C MoSU015R_A02_BE471272Td09P005B03P023B021R1_016.ab1   (47)   453     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C MoSU015R_A02_BE471272Td09P005B03P023B021R1_016.ab1   500 
  196    MoSU015F_A02_BE471272Td09P005B03P023B021F1_016.ab1   149 
  200  C MoSU015R_A02_BE471272Td09P005B03P023B021R1_016.ab1   301 
  336    MoSU015F_A02_BE471272Td09P005B03P023B021F1_016.ab1   289 
  352  C MoSU015R_A02_BE471272Td09P005B03P023B021R1_016.ab1   149 
  400    MoSU015F_A02_BE471272Td09P005B03P023B021F1_016.ab1   353 
  408  C MoSU015R_A02_BE471272Td09P005B03P023B021R1_016.ab1    93 
  416    MoSU015F_A02_BE471272Td09P005B03P023B021F1_016.ab1   369 
  436  C MoSU015R_A02_BE471272Td09P005B03P023B021R1_016.ab1    65 
  440    MoSU015F_A02_BE471272Td09P005B03P023B021F1_016.ab1   393 
Contig length: old 516, new 517

Contig length: old 517, new 517
New start: 0