No. words: 1032; after pruning: 1006


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.1 (1,1:342)  323  0.00 0.29 0.58  MoSU014F_G03_BE488496Ld01P018B03P018B091F1_019.ab1        1   344 (178)  C MoSU014R_G03_BE488496Ld01P018B03P018B091R1_019.ab1   (167)   343     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1  C MoSU014R_G03_BE488496Ld01P018B03P018B091R1_019.ab1   510 
  273    MoSU014F_G03_BE488496Ld01P018B03P018B091F1_019.ab1   105 
  281  C MoSU014R_G03_BE488496Ld01P018B03P018B091R1_019.ab1   230 
  361    MoSU014F_G03_BE488496Ld01P018B03P018B091F1_019.ab1   193 
  373  C MoSU014R_G03_BE488496Ld01P018B03P018B091R1_019.ab1   138 
  413    MoSU014F_G03_BE488496Ld01P018B03P018B091F1_019.ab1   245 
  425  C MoSU014R_G03_BE488496Ld01P018B03P018B091R1_019.ab1    86 
  433    MoSU014F_G03_BE488496Ld01P018B03P018B091F1_019.ab1   265 
  453  C MoSU014R_G03_BE488496Ld01P018B03P018B091R1_019.ab1    58 
  469    MoSU014F_G03_BE488496Ld01P018B03P018B091F1_019.ab1   301 
Contig length: old 689, new 690

Contig length: old 690, new 690
New start: 0