No. words: 735; after pruning: 709


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.9 -0.9 (1,1:343)  182  3.24 0.93 0.00  MoSU014F_E04_BE488496Ld07P018B03P018B091F1_024.ab1        5   220 (0)  C MoSU014R_E04_BE488496Ld07P018B03P018B091R1_024.ab1   (174)   341   124 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.9       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1  C MoSU014R_E04_BE488496Ld07P018B03P018B091R1_024.ab1   515 
Contig length: old 515, new 515

Contig length: old 515, new 515
New start: 0