No. words: 1655; after pruning: 1629


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:762)  717  0.79 0.00 0.13  MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1        1   763 (42)  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   (88)   762     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   850 
  100    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1    12 
  122  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   729 
  134    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1    46 
  138  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   713 
  212    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   124 
  224  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   627 
  256    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   168 
  272  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   579 
  280    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   192 
  312  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   539 
  320    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   232 
  344  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   507 
  352    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   264 
  408  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   443 
  428    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   340 
  552  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   299 
  564    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   476 
  600  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   251 
  612    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   524 
  644  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   207 
  648    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   560 
  660  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   191 
  672    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   584 
  728  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   123 
  732    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   644 
  736  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1   115 
  748    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   660 
  766  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1    85 
  786    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   698 
  819  C MoSU022R_D01_BE488670At02P005F04P005F101R1_009.ab1    32 
  831    MoSU022F_D01_BE488670At02P005F04P005F101F1_009.ab1   743 
Contig length: old 892, new 893

Contig length: old 893, new 893
New start: 0