No. words: 1621; after pruning: 1567


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:720)  672  1.25 0.00 0.00  MoSU022F_G01_BE488670Ld03P005F04P005F101F1_003.ab1        1   721 (35)  C MoSU022R_G01_BE488670Ld03P005F04P005F101R1_003.ab1   (144)   721     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C MoSU022R_G01_BE488670Ld03P005F04P005F101R1_003.ab1   865 
  156    MoSU022F_G01_BE488670Ld03P005F04P005F101F1_003.ab1    12 
  180  C MoSU022R_G01_BE488670Ld03P005F04P005F101R1_003.ab1   686 
  199    MoSU022F_G01_BE488670Ld03P005F04P005F101F1_003.ab1    55 
  223  C MoSU022R_G01_BE488670Ld03P005F04P005F101R1_003.ab1   643 
  232    MoSU022F_G01_BE488670Ld03P005F04P005F101F1_003.ab1    88 
  831  C MoSU022R_G01_BE488670Ld03P005F04P005F101R1_003.ab1    35 
  835    MoSU022F_G01_BE488670Ld03P005F04P005F101F1_003.ab1   691 
  843  C MoSU022R_G01_BE488670Ld03P005F04P005F101R1_003.ab1    23 
  855    MoSU022F_G01_BE488670Ld03P005F04P005F101F1_003.ab1   711 
Contig length: old 900, new 900

Contig length: old 900, new 900
New start: 0 
S Change at: 64; seg lengths: entry 1, contig 1
S Change at: 127; seg lengths: entry 1, contig 1
S Change at: 195; seg lengths: entry 1, contig 1