No. words: 1548; after pruning: 1508


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.7 (1,1:718)  606  2.74 0.00 0.29  MoSU022F_C02_BE488670Ld07P005F04P005F101F1_012.ab1       25   718 (135)  C MoSU022R_C02_BE488670Ld07P005F04P005F101R1_012.ab1   (0)   695     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1    MoSU022F_C02_BE488670Ld07P005F04P005F101F1_012.ab1     1 
  681  C MoSU022R_C02_BE488670Ld07P005F04P005F101R1_012.ab1    40 
  714    MoSU022F_C02_BE488670Ld07P005F04P005F101F1_012.ab1   715 
Contig length: old 853, new 852

Contig length: old 852, new 852
New start: 0