No. words: 1472; after pruning: 1446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:691)  669  0.00 0.00 0.00  MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1        1   692 (42)  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   (46)   692     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   738 
   58    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1    12 
   70  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   669 
   78    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1    32 
   82  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   657 
   94    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1    48 
   98  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   641 
  118    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1    72 
  126  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   613 
  158    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   112 
  166  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   573 
  174    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   128 
  178  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   561 
  194    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   148 
  198  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   541 
  206    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   160 
  226  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   513 
  242    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   196 
  254  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   485 
  262    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   216 
  306  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   433 
  314    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   268 
  318  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   421 
  362    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   316 
  390  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   349 
  398    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   352 
  614  C MoSU022R_A01_BE488670Tu01P005F04P005F101R1_015.ab1   125 
  618    MoSU022F_A01_BE488670Tu01P005F04P005F101F1_015.ab1   572 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0