No. words: 1554; after pruning: 1528


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:736)  712  0.27 0.14 0.00  MoSU023F_E09_BE490007At01P019G02P019G081F1_071.ab1        1   737 (39)  C MoSU023R_E09_BE490007At01P019G02P019G081R1_071.ab1   (40)   738     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C MoSU023R_E09_BE490007At01P019G02P019G081R1_071.ab1   778 
   50    MoSU023F_E09_BE490007At01P019G02P019G081F1_071.ab1     9 
  426  C MoSU023R_E09_BE490007At01P019G02P019G081R1_071.ab1   353 
  466    MoSU023F_E09_BE490007At01P019G02P019G081F1_071.ab1   425 
  474  C MoSU023R_E09_BE490007At01P019G02P019G081R1_071.ab1   305 
  694    MoSU023F_E09_BE490007At01P019G02P019G081F1_071.ab1   653 
  703  C MoSU023R_E09_BE490007At01P019G02P019G081R1_071.ab1    76 
  735    MoSU023F_E09_BE490007At01P019G02P019G081F1_071.ab1   694 
  752  C MoSU023R_E09_BE490007At01P019G02P019G081R1_071.ab1    27 
  772    MoSU023F_E09_BE490007At01P019G02P019G081F1_071.ab1   731 
Contig length: old 817, new 817

Contig length: old 817, new 817
New start: 0