No. words: 1487; after pruning: 1461


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:583)  565  0.17 0.00 0.17  MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1        1   584 (143)  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   (177)   583     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   760 
  357    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   180 
  361  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   400 
  381    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   204 
  389  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   372 
  453    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   276 
  465  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   296 
  485    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   308 
  489  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   272 
  517    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   340 
  529  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   232 
  565    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   388 
  569  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1   192 
  673    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   496 
  685  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1    76 
  693    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   516 
  736  C MoSU023R_G09_BE490007Ld01P019G02P019G081R1_067.ab1    26 
  756    MoSU023F_G09_BE490007Ld01P019G02P019G081F1_067.ab1   579 
Contig length: old 903, new 904

Contig length: old 904, new 904
New start: 0