No. words: 1394; after pruning: 1368


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:583)  568  0.34 0.00 0.00  MoSU023F_E10_BE490007Ld07P019G02P019G081F1_072.ab1        1   584 (52)  C MoSU023R_E10_BE490007Ld07P019G02P019G081R1_072.ab1   (174)   584     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C MoSU023R_E10_BE490007Ld07P019G02P019G081R1_072.ab1   758 
  753    MoSU023F_E10_BE490007Ld07P019G02P019G081F1_072.ab1   579 
Contig length: old 810, new 810

Contig length: old 810, new 810
New start: 0