No. words: 1040; after pruning: 1000


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:531)  218  6.09 0.00 0.36  MoSU023F_G10_BE490007Ld09P019G02P019G081F1_068.ab1        1   279 (0)  C MoSU023R_G10_BE490007Ld09P019G02P019G081R1_068.ab1   (230)   531   254 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  102 nodes

 53 str. conn. components

Path
    1  C MoSU023R_G10_BE490007Ld09P019G02P019G081R1_068.ab1   761 
Contig length: old 761, new 761

Contig length: old 761, new 761
New start: 0 
S Change at: 113; seg lengths: entry 1, contig 1