No. words: 1266; after pruning: 1240


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:582)  564  0.00 0.34 0.00  MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1        1   582 (45)  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1   (55)   584     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1   639 
   88    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1    31 
  100  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1   540 
  108    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1    51 
  116  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1   524 
  212    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1   155 
  420  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1   220 
  440    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1   383 
  516  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1   124 
  568    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1   511 
  588  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1    52 
  604    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1   547 
  616  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1    24 
  620    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1   563 
  624  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1    16 
  628    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1   571 
  632  C MoSU023R_A09_BE490007Tu01P019G02P019G081R1_079.ab1     8 
  636    MoSU023F_A09_BE490007Tu01P019G02P019G081F1_079.ab1   579 
Contig length: old 683, new 684

Contig length: old 684, new 684
New start: 0