No. words: 1697; after pruning: 1671


Histogram of relative pair offsets, for read pairs with multiple alignments:
99    12

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:997)  683  0.00 0.00 0.14  MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1      108   806 (0)  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   (0)   891   194 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1     1 
  499  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   500 
  503    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   503 
  527  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   472 
  531    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   531 
  563  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   436 
  571    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   571 
  575  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   424 
  595    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   595 
  607  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   393 
  623    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   623 
  627  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   373 
  631    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   631 
  635  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   365 
  647    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   647 
  651  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   349 
  675    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   675 
  679  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   321 
  687    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   687 
  691  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   309 
  695    MoSU024F_F09_BE490149At02P019G04P019G101F1_069.ab1   695 
  711  C MoSU024R_F09_BE490149At02P019G04P019G101R1_069.ab1   289 
Contig length: old 998, new 999

Contig length: old 999, new 999
New start: 0