No. words: 1517; after pruning: 1491


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:1017)  488  0.00 0.00 0.00  MoSU005F_C01_BE490219As01P015G01G071F1_002.ab1      262   760 (0)  C MoSU005R_C01_BE490219As01P015G01G071R1_002.ab1   (0)   757   259 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    MoSU005F_C01_BE490219As01P015G01G071F1_002.ab1     1 
  465  C MoSU005R_C01_BE490219As01P015G01G071R1_002.ab1   554 
  477    MoSU005F_C01_BE490219As01P015G01G071F1_002.ab1   477 
  505  C MoSU005R_C01_BE490219As01P015G01G071R1_002.ab1   514 
Contig length: old 1018, new 1018

Contig length: old 1018, new 1018
New start: 0