No. words: 1571; after pruning: 1545


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:994)  561  0.17 0.00 0.00  MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1      221   796 (0)  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   (0)   775   200 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1     1 
  312  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   684 
  316    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1   316 
  392  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   604 
  412    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1   412 
  420  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   576 
  424    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1   424 
  432  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   564 
  436    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1   436 
  440  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   556 
  464    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1   464 
  468  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   528 
  472    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1   472 
  484  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   512 
  516    MoSU010F_C05_BE490219As01P018H01P018H071F1_043.ab1   516 
  520  C MoSU010R_C05_BE490219As01P018H01P018H071R1_043.ab1   476 
Contig length: old 995, new 995

Contig length: old 995, new 995
New start: 0