No. words: 1598; after pruning: 1558


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:1023)  543  0.70 0.17 0.17  MoSU005F_D01_BE490219As02P015G01G071F1_010.ab1      264   837 (0)  C MoSU005R_D01_BE490219As02P015G01G071R1_010.ab1   (0)   761   188 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    MoSU005F_D01_BE490219As02P015G01G071F1_010.ab1     1 
  443  C MoSU005R_D01_BE490219As02P015G01G071R1_010.ab1   582 
  447    MoSU005F_D01_BE490219As02P015G01G071F1_010.ab1   447 
  451  C MoSU005R_D01_BE490219As02P015G01G071R1_010.ab1   574 
  455    MoSU005F_D01_BE490219As02P015G01G071F1_010.ab1   455 
  491  C MoSU005R_D01_BE490219As02P015G01G071R1_010.ab1   534 
  507    MoSU005F_D01_BE490219As02P015G01G071F1_010.ab1   507 
  515  C MoSU005R_D01_BE490219As02P015G01G071R1_010.ab1   510 
Contig length: old 1024, new 1024

Contig length: old 1024, new 1024
New start: 0