No. words: 1255; after pruning: 1229


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (1,1:861)  375  0.76 0.00 0.00  MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1      254   646 (0)  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   (0)   609   217 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1     1 
  258  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   605 
  262    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   262 
  354  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   509 
  358    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   358 
  388  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   475 
  392    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   392 
  454  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   409 
  462    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   462 
  470  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   393 
  490    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   490 
  498  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   365 
  522    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   522 
  530  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   333 
  582    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   582 
  586  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   277 
  595    MoSU005F_H01_BE490219Ld02P015G01G071F1_012.ab1   595 
  599  C MoSU005R_H01_BE490219Ld02P015G01G071R1_012.ab1   264 
Contig length: old 862, new 862

Contig length: old 862, new 862
New start: 0