No. words: 1513; after pruning: 1473


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:829)  656  0.29 0.15 0.00  MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1        1   680 (0)  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   (2)   831   151 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   833 
    6    MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1     4 
   14  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   820 
   23    MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1    20 
  228  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   606 
  232    MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1   229 
  244  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   590 
  256    MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1   253 
  264  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   570 
  300    MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1   297 
  312  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   522 
  384    MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1   381 
  388  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   446 
  468    MoSU010F_H05_BE490219Ld02P018H01P018H071F1_033.ab1   465 
  476  C MoSU010R_H05_BE490219Ld02P018H01P018H071R1_033.ab1   358 
Contig length: old 833, new 833

Contig length: old 833, new 833
New start: 0