No. words: 1728; after pruning: 1702


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 17.0 (1,1:830)  787  0.00 0.12 0.12  MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1        4   822 (5)  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   (74)   827     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   901 
   78    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1     7 
   82  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   820 
   90    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1    19 
  246  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   656 
  250    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   179 
  314  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   588 
  322    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   251 
  334  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   568 
  342    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   271 
  346  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   556 
  370    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   299 
  386  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   516 
  410    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   339 
  414  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   488 
  418    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   347 
  430  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   472 
  454    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   383 
  458  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   444 
  486    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   415 
  490  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   412 
  498    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   427 
  526  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   376 
  538    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   467 
  546  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   356 
  550    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   479 
  558  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   344 
  606    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   535 
  610  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   292 
  638    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   567 
  642  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   260 
  666    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   595 
  670  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1   232 
  810    MoSU010F_A06_BE490219Ld03P018H01P018H071F1_048.ab1   739 
  814  C MoSU010R_A06_BE490219Ld03P018H01P018H071R1_048.ab1    88 
Contig length: old 901, new 901

Contig length: old 901, new 901
New start: 0