No. words: 1463; after pruning: 1437


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:870)  570  0.17 0.00 0.17  MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1      126   717 (0)  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   (0)   746   156 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1     1 
  293  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   579 
  297    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   297 
  309  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   563 
  313    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   313 
  321  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   551 
  325    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   325 
  341  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   531 
  345    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   345 
  357  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   515 
  361    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   361 
  377  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   495 
  389    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   389 
  393  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   479 
  397    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   397 
  421  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   451 
  425    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   425 
  433  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   439 
  493    MoSU005F_B02_BE490219Ld04P015G01G071F1_013.ab1   493 
  497  C MoSU005R_B02_BE490219Ld04P015G01G071R1_013.ab1   375 
Contig length: old 871, new 871

Contig length: old 871, new 871
New start: 0