No. words: 1330; after pruning: 1304


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:833)  475  0.20 0.20 0.00  MoSU010F_D06_BE490219Ld06P018H01P018H071F1_042.ab1      176   670 (0)  C MoSU010R_D06_BE490219Ld06P018H01P018H071R1_042.ab1   (0)   660   165 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1    MoSU010F_D06_BE490219Ld06P018H01P018H071F1_042.ab1     1 
  297  C MoSU010R_D06_BE490219Ld06P018H01P018H071R1_042.ab1   538 
  313    MoSU010F_D06_BE490219Ld06P018H01P018H071F1_042.ab1   313 
  373  C MoSU010R_D06_BE490219Ld06P018H01P018H071R1_042.ab1   462 
  409    MoSU010F_D06_BE490219Ld06P018H01P018H071F1_042.ab1   409 
  441  C MoSU010R_D06_BE490219Ld06P018H01P018H071R1_042.ab1   394 
  449    MoSU010F_D06_BE490219Ld06P018H01P018H071F1_042.ab1   449 
  457  C MoSU010R_D06_BE490219Ld06P018H01P018H071R1_042.ab1   378 
  469    MoSU010F_D06_BE490219Ld06P018H01P018H071F1_042.ab1   469 
  473  C MoSU010R_D06_BE490219Ld06P018H01P018H071R1_042.ab1   362 
Contig length: old 834, new 834

Contig length: old 834, new 834
New start: 0