No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.4 (1,1:827)  537  0.36 0.00 0.00  MoSU010F_F06_BE490219Ld08P018H01P018H071F1_038.ab1       56   611 (2)  C MoSU010R_F06_BE490219Ld08P018H01P018H071R1_038.ab1   (0)   773   218 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    MoSU010F_F06_BE490219Ld08P018H01P018H071F1_038.ab1     1 
  243  C MoSU010R_F06_BE490219Ld08P018H01P018H071R1_038.ab1   586 
  255    MoSU010F_F06_BE490219Ld08P018H01P018H071F1_038.ab1   255 
  275  C MoSU010R_F06_BE490219Ld08P018H01P018H071R1_038.ab1   554 
  287    MoSU010F_F06_BE490219Ld08P018H01P018H071F1_038.ab1   287 
  291  C MoSU010R_F06_BE490219Ld08P018H01P018H071R1_038.ab1   538 
  295    MoSU010F_F06_BE490219Ld08P018H01P018H071F1_038.ab1   295 
  299  C MoSU010R_F06_BE490219Ld08P018H01P018H071R1_038.ab1   530 
  343    MoSU010F_F06_BE490219Ld08P018H01P018H071F1_038.ab1   343 
  351  C MoSU010R_F06_BE490219Ld08P018H01P018H071R1_038.ab1   478 
Contig length: old 828, new 828

Contig length: old 828, new 828
New start: 0