No. words: 1245; after pruning: 1219


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:836)  397  0.25 0.00 0.00  MoSU010F_G06_BE490219Ld09P018H01P018H071F1_036.ab1      203   610 (0)  C MoSU010R_G06_BE490219Ld09P018H01P018H071R1_036.ab1   (0)   635   228 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  200 nodes

 102 str. conn. components

Path
    1    MoSU010F_G06_BE490219Ld09P018H01P018H071F1_036.ab1     1 
  323  C MoSU010R_G06_BE490219Ld09P018H01P018H071R1_036.ab1   515 
  335    MoSU010F_G06_BE490219Ld09P018H01P018H071F1_036.ab1   335 
  347  C MoSU010R_G06_BE490219Ld09P018H01P018H071R1_036.ab1   491 
Contig length: old 837, new 837

Contig length: old 837, new 837
New start: 0