No. words: 1527; after pruning: 1501


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:867)  634  0.30 0.00 0.00  MoSU005F_H02_BE490219Ld10P015G01G071F1_016.ab1      143   801 (0)  C MoSU005R_H02_BE490219Ld10P015G01G071R1_016.ab1   (0)   726    68 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1    MoSU005F_H02_BE490219Ld10P015G01G071F1_016.ab1     1 
  355  C MoSU005R_H02_BE490219Ld10P015G01G071R1_016.ab1   514 
  359    MoSU005F_H02_BE490219Ld10P015G01G071F1_016.ab1   359 
  391  C MoSU005R_H02_BE490219Ld10P015G01G071R1_016.ab1   478 
  395    MoSU005F_H02_BE490219Ld10P015G01G071F1_016.ab1   395 
  439  C MoSU005R_H02_BE490219Ld10P015G01G071R1_016.ab1   430 
  447    MoSU005F_H02_BE490219Ld10P015G01G071F1_016.ab1   447 
  471  C MoSU005R_H02_BE490219Ld10P015G01G071R1_016.ab1   398 
  483    MoSU005F_H02_BE490219Ld10P015G01G071F1_016.ab1   483 
  487  C MoSU005R_H02_BE490219Ld10P015G01G071R1_016.ab1   382 
  519    MoSU005F_H02_BE490219Ld10P015G01G071F1_016.ab1   519 
  527  C MoSU005R_H02_BE490219Ld10P015G01G071R1_016.ab1   342 
Contig length: old 868, new 868

Contig length: old 868, new 868
New start: 0