No. words: 1497; after pruning: 1471


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:718)  694  0.28 0.00 0.00  MoSU033F_G11_BE490219Sn25P024F10P015G071F1_083.ab1        1   719 (39)  C MoSU033R_G11_BE490219Sn25P024F10P015G071R1_083.ab1   (20)   719     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU033R_G11_BE490219Sn25P024F10P015G071R1_083.ab1   739 
   36    MoSU033F_G11_BE490219Sn25P024F10P015G071F1_083.ab1    16 
  164  C MoSU033R_G11_BE490219Sn25P024F10P015G071R1_083.ab1   576 
  256    MoSU033F_G11_BE490219Sn25P024F10P015G071F1_083.ab1   236 
  560  C MoSU033R_G11_BE490219Sn25P024F10P015G071R1_083.ab1   180 
  616    MoSU033F_G11_BE490219Sn25P024F10P015G071F1_083.ab1   596 
  620  C MoSU033R_G11_BE490219Sn25P024F10P015G071R1_083.ab1   120 
  628    MoSU033F_G11_BE490219Sn25P024F10P015G071F1_083.ab1   608 
  644  C MoSU033R_G11_BE490219Sn25P024F10P015G071R1_083.ab1    96 
  692    MoSU033F_G11_BE490219Sn25P024F10P015G071F1_083.ab1   672 
  696  C MoSU033R_G11_BE490219Sn25P024F10P015G071R1_083.ab1    44 
  720    MoSU033F_G11_BE490219Sn25P024F10P015G071F1_083.ab1   700 
Contig length: old 778, new 778

Contig length: old 778, new 778
New start: 0 
S Change at: 24; seg lengths: entry 1, contig 1