No. words: 1484; after pruning: 1458


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:730)  696  0.00 0.00 0.00  MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1       18   731 (39)  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1   (0)   714     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1     1 
   41  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1   691 
   45    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1    45 
  121  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1   611 
  125    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   125 
  157  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1   575 
  221    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   221 
  389  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1   343 
  573    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   573 
  593  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1   139 
  621    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   621 
  637  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1    95 
  653    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   653 
  657  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1    75 
  705    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   705 
  709  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1    23 
  713    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   713 
  717  C MoSU033R_A12_BE490219Sn26P024F10P015G071R1_096.ab1    15 
  721    MoSU033F_A12_BE490219Sn26P024F10P015G071F1_096.ab1   721 
Contig length: old 770, new 770

Contig length: old 770, new 770
New start: 0