No. words: 1513; after pruning: 1459


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:731)  697  0.55 0.27 0.00  MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1        1   731 (41)  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   (8)   733     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   741 
   28    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1    19 
   32  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   710 
   36    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1    27 
   60  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   682 
   64    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1    55 
  166  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   576 
  230    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   221 
  306  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   436 
  326    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   317 
  346  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   396 
  358    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   349 
  366  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   376 
  382    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   373 
  394  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   348 
  446    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   437 
  462  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   280 
  582    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   573 
  590  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   152 
  594    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   585 
  598  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1   144 
  650    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   641 
  654  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1    88 
  658    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   649 
  662  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1    80 
  686    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   677 
  712  C MoSU033R_C12_BE490219Sn28P024F10P015G071R1_092.ab1    29 
  732    MoSU033F_C12_BE490219Sn28P024F10P015G071F1_092.ab1   723 
Contig length: old 781, new 781

Contig length: old 781, new 781
New start: 0 
S Change at: 24; seg lengths: entry 1, contig 1