No. words: 1504; after pruning: 1464


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 15.3 (1,1:723)  702  0.14 0.00 0.00  MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1        1   721 (39)  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   (20)   724     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   744 
   25    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1     5 
  101  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   644 
  105    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1    85 
  170  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   575 
  198    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   178 
  206  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   539 
  230    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   210 
  506  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   239 
  514    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   494 
  522  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   223 
  530    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   510 
  610  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   135 
  622    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   602 
  638  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1   107 
  654    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   634 
  662  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1    83 
  718    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   698 
  734  C MoSU033R_E12_BE490219Sn30P024F10P015G071R1_088.ab1    11 
  738    MoSU033F_E12_BE490219Sn30P024F10P015G071F1_088.ab1   718 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0